pylabrobot.resources.Plate#
- class pylabrobot.resources.Plate(name: str, size_x: float, size_y: float, size_z: float, ordered_items: Dict[str, 'Well'] | None = None, ordering: List[str] | None = None, category: str = 'plate', lid: Lid | None = None, model: str | None = None, plate_type: Literal['skirted', 'semi-skirted', 'non-skirted'] = 'skirted')#
Bases:
ItemizedResource
[Well
]Base class for Plate resources.
Attributes
Get the name of this resource.
The number of items in the x direction, if the resource is a full grid.
The number of items in the y direction, if the resource is a full grid.
Methods
__init__
(name, size_x, size_y, size_z[, ...])Initialize a Plate resource.
assign_child_resource
(resource[, location, ...])Assign a child resource to this resource.
center
([x, y, z])Get the center of this resource.
centers
([xn, yn, zn])Get equally spaced points in the x, y, and z directions.
copy
()deregister_did_assign_resource_callback
(callback)Remove a callback that will be called after a resource is assigned to this resource.
Remove a callback that will be called after a resource is unassigned from this resource.
deregister_state_update_callback
(callback)Remove a callback that will be called when the state of the resource changes.
Remove a callback that will be called before a resource is assigned to this resource.
Remove a callback that will be called before a resource is unassigned from this resource.
deserialize
(data[, allow_marshal])Deserialize a resource from a dictionary.
Disable volume tracking for all wells in the plate.
Enable volume tracking for all wells in the plate.
get_absolute_location
([x, y, z])Get the absolute location of this resource, probably within the
pylabrobot.resources.Deck
.Get the absolute rotation of this resource.
Get the absolute size in the x direction.
Get the absolute size in the y direction.
Get the absolute size in the z direction.
Recursively get all children of this resource.
Get all items in the resource.
get_anchor
(x, y, z)Get a relative location within the resource.
get_child_identifier
(item)Get the identifier of the item.
Recursively finds the highest known point in absolute space.
get_item
(identifier)Get the item with the given identifier.
get_items
(identifiers)Get the items with the given identifier.
get_quadrant
(quadrant)Return the wells in the specified quadrant.
get_resource
(name)Get a resource by name.
get_root
()Get the root of the resource tree.
Local size in the x direction.
Local size in the y direction.
Local size in the z direction.
get_well
(identifier)Get the item with the given identifier.
get_wells
(identifier)Get the wells with the given identifier.
has_lid
()index_of_item
(item)Return the index of the given item in the resource, or
None
if not found.load_all_state
(state)Load state for this resource and all children.
load_from_json_file
(json_file)Loads resources from a JSON file.
load_state
(state)Load state for this resource only.
Load the state of this resource and all children from a JSON file.
make_grid
([occupied_func])print_grid
([occupied_func])register_did_assign_resource_callback
(callback)Add a callback that will be called after a resource is assigned to this resource.
register_did_unassign_resource_callback
(callback)Add a callback that will be called after a resource is unassigned from this resource.
register_state_update_callback
(callback)Register a callback that will be called when the state of the resource changes.
register_will_assign_resource_callback
(callback)Add a callback that will be called before a resource is assigned to this resource.
Add a callback that will be called before a resource is unassigned from this resource.
rotate
([x, y, z])Rotate counter-clockwise by the given number of degrees.
rotated
([x, y, z])Return a copy of this resource rotated by the given number of degrees.
save
(fn[, indent])Save a resource to a JSON file.
save_state_to_file
(fn[, indent])Save the state of this resource and all children to a JSON file.
Serialize this resource.
Serialize the state of this resource and all children.
Serialize the state of this resource only.
set_well_liquids
(liquids)Update the liquid in the volume tracker for each well in the plate.
traverse
(batch_size, direction[, repeat])Traverse the items in this resource.
unassign
()Unassign this resource from its parent.
unassign_child_resource
(resource)Unassign a child resource from this resource.