pylabrobot.resources.TubeRack#

class pylabrobot.resources.TubeRack(name: str, size_x: float, size_y: float, size_z: float, ordered_items: Dict[str, Tube] | None = None, model: str | None = None)#

Bases: ItemizedResource[Tube]

Tube rack resource.

Attributes

items

name

Get the name of this resource.

num_items

num_items_x

The number of items in the x direction, if the resource is a full grid.

num_items_y

The number of items in the y direction, if the resource is a full grid.

Methods

__init__(name, size_x, size_y, size_z[, ...])

Initialize a TubeRack resource.

assign_child_resource(resource[, location, ...])

Assign a child resource to this resource.

center([x, y, z])

Get the center of this resource.

centers([xn, yn, zn])

Get equally spaced points in the x, y, and z directions.

copy()

deregister_did_assign_resource_callback(callback)

Remove a callback that will be called after a resource is assigned to this resource.

deregister_did_unassign_resource_callback(...)

Remove a callback that will be called after a resource is unassigned from this resource.

deregister_state_update_callback(callback)

Remove a callback that will be called when the state of the resource changes.

deregister_will_assign_resource_callback(...)

Remove a callback that will be called before a resource is assigned to this resource.

deregister_will_unassign_resource_callback(...)

Remove a callback that will be called before a resource is unassigned from this resource.

deserialize(data[, allow_marshal])

Deserialize a resource from a dictionary.

disable_volume_trackers()

Disable volume tracking for all tubes in the rack.

enable_volume_trackers()

Enable volume tracking for all tubes in the rack.

get_absolute_location([x, y, z])

Get the absolute location of this resource, probably within the pylabrobot.resources.Deck.

get_absolute_rotation()

Get the absolute rotation of this resource.

get_absolute_size_x()

Get the absolute size in the x direction.

get_absolute_size_y()

Get the absolute size in the y direction.

get_absolute_size_z()

Get the absolute size in the z direction.

get_all_children()

Recursively get all children of this resource.

get_all_items()

Get all items in the resource.

get_anchor(x, y, z)

Get a relative location within the resource.

get_highest_known_point()

Recursively finds the highest known point in absolute space.

get_item(identifier)

Get the item with the given identifier.

get_items(identifiers)

Get the items with the given identifier.

get_resource(name)

Get a resource by name.

get_root()

Get the root of the resource tree.

get_size_x()

Local size in the x direction.

get_size_y()

Local size in the y direction.

get_size_z()

Local size in the z direction.

get_tube(identifier)

Get the item with the given identifier.

get_tubes(identifier)

Get the tubes with the given identifier.

index_of_item(item)

Return the index of the given item in the resource, or None if not found.

load_all_state(state)

Load state for this resource and all children.

load_from_json_file(json_file)

Loads resources from a JSON file.

load_state(state)

Load state for this resource only.

load_state_from_file(fn)

Load the state of this resource and all children from a JSON file.

make_grid([occupied_func])

print_grid([occupied_func])

register_did_assign_resource_callback(callback)

Add a callback that will be called after a resource is assigned to this resource.

register_did_unassign_resource_callback(callback)

Add a callback that will be called after a resource is unassigned from this resource.

register_state_update_callback(callback)

Register a callback that will be called when the state of the resource changes.

register_will_assign_resource_callback(callback)

Add a callback that will be called before a resource is assigned to this resource.

register_will_unassign_resource_callback(...)

Add a callback that will be called before a resource is unassigned from this resource.

rotate([x, y, z])

Rotate counter-clockwise by the given number of degrees.

rotated([x, y, z])

Return a copy of this resource rotated by the given number of degrees.

save(fn[, indent])

Save a resource to a JSON file.

save_state_to_file(fn[, indent])

Save the state of this resource and all children to a JSON file.

serialize()

Serialize this resource.

serialize_all_state()

Serialize the state of this resource and all children.

serialize_state()

Serialize the state of this resource only.

set_tube_liquids(liquids)

Update the liquid in the volume tracker for each tube in the rack.

traverse(batch_size, direction[, repeat])

Traverse the items in this resource.

unassign()

Unassign this resource from its parent.

unassign_child_resource(resource)

Unassign a child resource from this resource.

Parameters: